"quality control of datasets"
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<link href="//maxcdn.bootstrapcdn.com/bootstrap/3.3.0/css/bootstrap.min.css" rel="stylesheet" id="bootstrap-css"> <script src="//maxcdn.bootstrapcdn.com/bootstrap/3.3.0/js/bootstrap.min.js"></script> <script src="//code.jquery.com/jquery-1.11.1.min.js"></script> <!------ Include the above in your HEAD tag ----------> <nav class="navbar navbar-inverse navbar-fixed-top"> <div class="container"> <!-- Static navbar --> <!--<nav class="navbar navbar-default">--> <div class="container-fluid"> <div class="navbar-header"> <button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#navbar" aria-expanded="false" aria-controls="navbar"> <span class="sr-only">Toggle navigation</span> <span class="icon-bar"></span> <span class="icon-bar"></span> <span class="icon-bar"></span> </button> <a class="navbar-brand" href="#">Similar Data</a> </div> <div id="navbar" class="navbar-collapse collapse"> <ul class="nav navbar-nav"> <li><a href="#">Home</a></li> <li><a href="#">About</a></li> <li><a href="#">Contact</a></li> </ul> <ul class="nav navbar-nav navbar-right"> <li><a href="http://cistrome.org/db/#/">Back to CistromeDB</a></li> </ul> </div> </div> </div> </nav> <div class="container"> <div class="row"> <div class="col-md-12"> <div class="panel panel-default"> <div class="panel-heading"> <h3 class="panel-title">Quality control of {{ id }}</h3> </div> <div class="panel-body"> <table class="table table-bordered"> <thead> <tr> <th>QC</th> <th>Sample</th> </tr> </thead> <tbody> <tr> <td>Raw sequence median quality score</td> <td>{{ qc.table.fastqc.0 }}</td> </tr> <tr> <td>% Reads uniquely mapped</td> <td>{{ qc.table.map.0 }}</td> </tr> <tr> <td>PCR bottleneck coefficient (PBC)</td> <td>{{ qc.table.pbc.0 }}</td> </tr> <tr> <td>Number of merged Total/Fold 10/Fold 20 peaks </td> <td>{{ qc.table.peaks.0 }} / {{ qc.table.peaks.1 }} / {{ qc.table.peaks.2 }}</td> </tr> <tr> <td>Fraction of reads in peaks (FRiP)</td> <td>{{ qc.table.frip.0 }}</td> </tr> <tr> <td>% Peaks in promoter/exon/intron/intergenic</td> <td>{{ qc.table.meta.0 }}</td> </tr> <tr> <td>% Top 5k peaks overlapping with union DHS</td> <td>{{ qc.table.dhs.0 }}</td> </tr> </tbody> </table> </div> </div> </div> </div> </div>
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